J3_7AZO_042
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UAAAC*GGGUCGUG*CG
- Length
- 15 nucleotides
- Bulged bases
- 7AZO|1|23SB|U|289
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_042 not in the Motif Atlas
- Homologous match to J3_4WF9_022
- Geometric discrepancy: 0.1723
- The information below is about J3_4WF9_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97971.2
- Basepair signature
- cWW-F-F-tSH-cSH-tWH-tWS-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7AZO|1|23SB|U|259
7AZO|1|23SB|A|260
7AZO|1|23SB|A|261
7AZO|1|23SB|A|262
7AZO|1|23SB|C|263
*
7AZO|1|23SB|G|283
7AZO|1|23SB|G|284
7AZO|1|23SB|G|285
7AZO|1|23SB|U|286
7AZO|1|23SB|C|287
7AZO|1|23SB|G|288
7AZO|1|23SB|U|289
7AZO|1|23SB|G|290
*
7AZO|1|23SB|C|397
7AZO|1|23SB|G|398
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L28B
- 50S ribosomal protein L28
- Chain L9B
- 50S ribosomal protein L9
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