J3_7AZO_060
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCCUAAG*UAGGAAUCU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 7AZO|1|16SB|C|694, 7AZO|1|16SB|A|696, 7AZO|1|16SB|A|697
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_060 not in the Motif Atlas
- Homologous match to J3_4LFB_014
- Geometric discrepancy: 0.0673
- The information below is about J3_4LFB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_63856.1
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-tHH-F-cWW-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7AZO|1|16SB|G|692
7AZO|1|16SB|C|693
7AZO|1|16SB|C|694
7AZO|1|16SB|U|695
7AZO|1|16SB|A|696
7AZO|1|16SB|A|697
7AZO|1|16SB|G|698
*
7AZO|1|16SB|U|1000
7AZO|1|16SB|A|1001
7AZO|1|16SB|G|1002
7AZO|1|16SB|G|1003
7AZO|1|16SB|A|1004
7AZO|1|16SB|A|1005
7AZO|1|16SB|U|1006
7AZO|1|16SB|C|1007
7AZO|1|16SB|U|1008
*
7AZO|1|16SB|A|1034
7AZO|1|16SB|G|1035
7AZO|1|16SB|C|1036
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain S12B
- 30S ribosomal protein S12
- Chain S16B
- 30S ribosomal protein S16
Coloring options: