J3_7JSW_018
3D structure
- PDB id
- 7JSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 7JSW|1|3|U|871
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7JSW_018 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1297
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
7JSW|1|3|C|826
7JSW|1|3|U|827
7JSW|1|3|U|828
7JSW|1|3|G|829
*
7JSW|1|3|C|857
7JSW|1|3|G|858
7JSW|1|3|G|859
7JSW|1|3|A|860
7JSW|1|3|G|861
*
7JSW|1|3|C|868
7JSW|1|3|G|869
7JSW|1|3|U|870
7JSW|1|3|U|871
7JSW|1|3|A|872
7JSW|1|3|A|873
7JSW|1|3|G|874
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S2
- Chain M
- 30S ribosomal protein S8
- Chain Z
- 30S ribosomal protein S21
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