3D structure

PDB id
7K50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GGGACG*CC*GAAAAGC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7K50_031 not in the Motif Atlas
Homologous match to J3_5J7L_069
Geometric discrepancy: 0.1034
The information below is about J3_5J7L_069
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_34864.2
Basepair signature
cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
Number of instances in this motif group
4

Unit IDs

7K50|1|1|G|1424
7K50|1|1|G|1425
7K50|1|1|G|1426
7K50|1|1|A|1427
7K50|1|1|C|1428
7K50|1|1|G|1429
*
7K50|1|1|C|1564
7K50|1|1|C|1565
*
7K50|1|1|G|1568
7K50|1|1|A|1569
7K50|1|1|A|1570
7K50|1|1|A|1571
7K50|1|1|A|1572
7K50|1|1|G|1573
7K50|1|1|C|1574

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain b
50S ribosomal protein L2

Coloring options:


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