3D structure

PDB id
7K50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CUUGACAU*ACAG*CUUACG
Length
18 nucleotides
Bulged bases
7K50|1|3|U|1212, 7K50|1|3|C|1214
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7K50_036 not in the Motif Atlas
Homologous match to J3_4LFB_016
Geometric discrepancy: 0.1607
The information below is about J3_4LFB_016
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_76475.2
Basepair signature
cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
Number of instances in this motif group
2

Unit IDs

7K50|1|3|C|990
7K50|1|3|U|991
7K50|1|3|U|992
7K50|1|3|G|993
7K50|1|3|A|994
7K50|1|3|C|995
7K50|1|3|A|996
7K50|1|3|U|997
*
7K50|1|3|A|1044
7K50|1|3|C|1045
7K50|1|3|A|1046
7K50|1|3|G|1047
*
7K50|1|3|C|1210
7K50|1|3|U|1211
7K50|1|3|U|1212
7K50|1|3|A|1213
7K50|1|3|C|1214
7K50|1|3|G|1215

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain S
30S ribosomal protein S14

Coloring options:


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