J3_7N2C_019

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

7N2C|1|23|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N2C_019 not in the Motif Atlas

Homologous match to J3_7A0S_007

Geometric discrepancy: 0.1043

The information below is about J3_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_47341.1

Basepair signature

cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

7N2C|1|23|C|1306
7N2C|1|23|A|1307
7N2C|1|23|A|1308
7N2C|1|23|G|1309
*
7N2C|1|23|C|1605
7N2C|1|23|C|1606
7N2C|1|23|C|1607
7N2C|1|23|A|1608
7N2C|1|23|A|1609
7N2C|1|23|A|1610
7N2C|1|23|C|1611
*
7N2C|1|23|G|1620
7N2C|1|23|U|1621
7N2C|1|23|G|1622

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Lh

50S ribosomal protein L34