3D structure

PDB id
7O19 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CUUG*CGGAG*CGUUAAG
Length
16 nucleotides
Bulged bases
7O19|1|AA|U|871
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7O19_004 not in the Motif Atlas
Homologous match to J3_5J7L_004
Geometric discrepancy: 0.0643
The information below is about J3_5J7L_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_85054.4
Basepair signature
cWW-tWW-tHS-F-cWW-tHS-cWW-F
Number of instances in this motif group
3

Unit IDs

7O19|1|AA|C|826
7O19|1|AA|U|827
7O19|1|AA|U|828
7O19|1|AA|G|829
*
7O19|1|AA|C|857
7O19|1|AA|G|858
7O19|1|AA|G|859
7O19|1|AA|A|860
7O19|1|AA|G|861
*
7O19|1|AA|C|868
7O19|1|AA|G|869
7O19|1|AA|U|870
7O19|1|AA|U|871
7O19|1|AA|A|872
7O19|1|AA|A|873
7O19|1|AA|G|874

Current chains

Chain AA
Ribosomal RNA 16S

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AH
30S ribosomal protein S8
Chain AU
30S ribosomal protein S21

Coloring options:


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