J3_7OSA_033
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUAUG*CGUCAUAGAG*CGUGUG
- Length
- 21 nucleotides
- Bulged bases
- 7OSA|1|25S|U|210
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OSA_033 not in the Motif Atlas
- Homologous match to J3_8P9A_044
- Geometric discrepancy: 0.1489
- The information below is about J3_8P9A_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_75408.1
- Basepair signature
- cWW-cWW-F-F-cSS-cSW-cWW-tHS-cWW-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|25S|C|185
7OSA|1|25S|U|186
7OSA|1|25S|A|187
7OSA|1|25S|U|188
7OSA|1|25S|G|189
*
7OSA|1|25S|C|205
7OSA|1|25S|G|206
7OSA|1|25S|U|207
7OSA|1|25S|C|208
7OSA|1|25S|A|209
7OSA|1|25S|U|210
7OSA|1|25S|A|211
7OSA|1|25S|G|212
7OSA|1|25S|A|213
7OSA|1|25S|G|214
*
7OSA|1|25S|C|226
7OSA|1|25S|G|227
7OSA|1|25S|U|228
7OSA|1|25S|G|229
7OSA|1|25S|U|230
7OSA|1|25S|G|231
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain 58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain uL24
- 60S ribosomal protein L26-A
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: