J3_7OSM_027
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAUC*GUU*ACUAAUA
- Length
- 14 nucleotides
- Bulged bases
- 7OSM|1|25S|A|2887, 7OSM|1|25S|U|2888
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OSM_027 not in the Motif Atlas
- Homologous match to J3_5TBW_014
- Geometric discrepancy: 0.0816
- The information below is about J3_5TBW_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_98597.1
- Basepair signature
- cWW-tWW-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSM|1|25S|U|2886
7OSM|1|25S|A|2887
7OSM|1|25S|U|2888
7OSM|1|25S|C|2889
*
7OSM|1|25S|G|2914
7OSM|1|25S|U|2915
7OSM|1|25S|U|2916
*
7OSM|1|25S|A|2930
7OSM|1|25S|C|2931
7OSM|1|25S|U|2932
7OSM|1|25S|A|2933
7OSM|1|25S|A|2934
7OSM|1|25S|U|2935
7OSM|1|25S|A|2936
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain uL13
- 60S ribosomal protein L16-A
- Chain uL14
- 60S ribosomal protein L23-B
- Chain uL3
- 60S ribosomal protein L3
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