J3_7OW7_017
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CCAUAC*GG*UG
- Length
- 10 nucleotides
- Bulged bases
- 7OW7|1|B|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OW7_017 not in the Motif Atlas
- Homologous match to J3_5TBW_045
- Geometric discrepancy: 0.0835
- The information below is about J3_5TBW_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52398.1
- Basepair signature
- cWW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7OW7|1|B|C|9
7OW7|1|B|C|10
7OW7|1|B|A|11
7OW7|1|B|U|12
7OW7|1|B|A|13
7OW7|1|B|C|14
*
7OW7|1|B|G|65
7OW7|1|B|G|66
*
7OW7|1|B|U|109
7OW7|1|B|G|110
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain G
- 60S ribosomal protein L5
- Chain N
- 60S ribosomal protein L21
- Chain p
- 60S ribosomal protein L10-like
Coloring options: