J3_7OW7_018
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- AC*GAGAAUU*ACACU
- Length
- 14 nucleotides
- Bulged bases
- 7OW7|1|C|A|62, 7OW7|1|C|U|63
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OW7_018 not in the Motif Atlas
- Homologous match to J3_8C3A_060
- Geometric discrepancy: 0.1663
- The information below is about J3_8C3A_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38265.2
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 8
Unit IDs
7OW7|1|C|A|44
7OW7|1|C|C|45
*
7OW7|1|C|G|58
7OW7|1|C|A|59
7OW7|1|C|G|60
7OW7|1|C|A|61
7OW7|1|C|A|62
7OW7|1|C|U|63
7OW7|1|C|U|64
*
7OW7|1|C|A|95
7OW7|1|C|C|96
7OW7|1|C|A|97
7OW7|1|C|C|98
7OW7|1|C|U|99
Current chains
- Chain C
- 5.8S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L23a
- Chain b
- 60S ribosomal protein L35
- Chain d
- 60S ribosomal protein L37
- Chain f
- 60S ribosomal protein L39
Coloring options: