J3_7PIA_008
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- CC*GUUGAU*AAUUG
- Length
- 13 nucleotides
- Bulged bases
- 7PIA|1|3|U|2837
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PIA_008 not in the Motif Atlas
- Homologous match to J3_4WF9_021
- Geometric discrepancy: 0.5557
- The information below is about J3_4WF9_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7PIA|1|3|C|2818
7PIA|1|3|C|2819
*
7PIA|1|3|G|2835
7PIA|1|3|U|2836
7PIA|1|3|U|2837
7PIA|1|3|G|2838
7PIA|1|3|A|2839
7PIA|1|3|U|2840
*
7PIA|1|3|A|2886
7PIA|1|3|A|2887
7PIA|1|3|U|2888
7PIA|1|3|U|2889
7PIA|1|3|G|2890
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain m
- 50S ribosomal protein L17
- Chain o
- 50S ribosomal protein L19
- Chain y
- 50S ribosomal protein L32
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