J3_7PWO_024
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CCAUCC*GG*UG
- Length
- 10 nucleotides
- Bulged bases
- 7PWO|1|3|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PWO_024 not in the Motif Atlas
- Homologous match to J3_5TBW_045
- Geometric discrepancy: 0.1817
- The information below is about J3_5TBW_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52398.1
- Basepair signature
- cWW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7PWO|1|3|C|9
7PWO|1|3|C|10
7PWO|1|3|A|11
7PWO|1|3|U|12
7PWO|1|3|C|13
7PWO|1|3|C|14
*
7PWO|1|3|G|66
7PWO|1|3|G|67
*
7PWO|1|3|U|110
7PWO|1|3|G|111
Current chains
- Chain 3
- rRNA 5S
Nearby chains
- Chain D2
- Ribosomal protein L5
- Chain I2
- Ribosomal protein L10
- Chain J2
- Ribosomal protein L11
- Chain T2
- Ribosomal protein L21
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