J3_7QGH_019

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

7QGH|1|N|A|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGH_019 not in the Motif Atlas

Homologous match to J3_5J7L_041

Geometric discrepancy: 0.078

The information below is about J3_5J7L_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7QGH|1|N|C|1298
7QGH|1|N|G|1299
7QGH|1|N|G|1300
7QGH|1|N|A|1301
7QGH|1|N|A|1302
7QGH|1|N|G|1303
*
7QGH|1|N|C|1625
7QGH|1|N|A|1626
7QGH|1|N|G|1627
*
7QGH|1|N|C|1639
7QGH|1|N|A|1640
7QGH|1|N|A|1641
7QGH|1|N|G|1642

Current chains

Chain N

23S rRNA

Nearby chains