J3_7QGH_020

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

7QGH|1|N|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGH_020 not in the Motif Atlas

Homologous match to J3_7A0S_007

Geometric discrepancy: 0.1319

The information below is about J3_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_71677.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7QGH|1|N|C|1306
7QGH|1|N|A|1307
7QGH|1|N|A|1308
7QGH|1|N|G|1309
*
7QGH|1|N|C|1605
7QGH|1|N|C|1606
7QGH|1|N|C|1607
7QGH|1|N|A|1608
7QGH|1|N|A|1609
7QGH|1|N|A|1610
7QGH|1|N|C|1611
*
7QGH|1|N|G|1620
7QGH|1|N|U|1621
7QGH|1|N|G|1622

Current chains

Chain N

23S rRNA

Nearby chains

Chain p

50S ribosomal protein L34