J3_7QGH_029

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CGG*CUUGA*UGACG

Length

13 nucleotides

Bulged bases

7QGH|1|0|U|653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGH_029 not in the Motif Atlas

Homologous match to J3_5J7L_051

Geometric discrepancy: 0.0859

The information below is about J3_5J7L_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_17385.4

Basepair signature

cWW-F-cWW-cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7QGH|1|0|C|586
7QGH|1|0|G|587
7QGH|1|0|G|588
*
7QGH|1|0|C|651
7QGH|1|0|U|652
7QGH|1|0|U|653
7QGH|1|0|G|654
7QGH|1|0|A|655
*
7QGH|1|0|U|751
7QGH|1|0|G|752
7QGH|1|0|A|753
7QGH|1|0|C|754
7QGH|1|0|G|755

Current chains

Chain 0

16S rRNA

Nearby chains

Chain 7

30S ribosomal protein S8

Chain B

30S ribosomal protein S12

Chain F

30S ribosomal protein S15

Chain H

30S ribosomal protein S17