J3_7QGU_027
3D structure
- PDB id
- 7QGU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the B. subtilis disome - stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.75 Å
Loop
- Sequence
- GC*GUGAAAAGCAC*GAGUGAAAGAGAUCC
- Length
- 28 nucleotides
- Bulged bases
- 7QGU|1|A|G|550, 7QGU|1|A|U|554
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QGU_027 not in the Motif Atlas
- Homologous match to J3_4WF9_011
- Geometric discrepancy: 0.2446
- The information below is about J3_4WF9_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17917.1
- Basepair signature
- cWW-tWH-cSS-cWW-tSH-tHH-cWW-F-F-tWW-tSS-cSS-tWW-tSH-tWH-cSW-F-tHS-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
7QGU|1|A|G|30
7QGU|1|A|C|31
*
7QGU|1|A|G|521
7QGU|1|A|U|522
7QGU|1|A|G|523
7QGU|1|A|A|524
7QGU|1|A|A|525
7QGU|1|A|A|526
7QGU|1|A|A|527
7QGU|1|A|G|528
7QGU|1|A|C|529
7QGU|1|A|A|530
7QGU|1|A|C|531
*
7QGU|1|A|G|542
7QGU|1|A|A|543
7QGU|1|A|G|544
7QGU|1|A|U|545
7QGU|1|A|G|546
7QGU|1|A|A|547
7QGU|1|A|A|548
7QGU|1|A|A|549
7QGU|1|A|G|550
7QGU|1|A|A|551
7QGU|1|A|G|552
7QGU|1|A|A|553
7QGU|1|A|U|554
7QGU|1|A|C|555
7QGU|1|A|C|556
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
- Chain T
- 50S ribosomal protein L23
- Chain U
- 50S ribosomal protein L24
Coloring options: