J3_7QV3_018

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CUAA*UGCAG*CAUUAAG

Length

16 nucleotides

Bulged bases

7QV3|1|a|U|881

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV3_018 not in the Motif Atlas

Homologous match to J3_4LFB_001

Geometric discrepancy: 0.1482

The information below is about J3_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_02285.1

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

2

Unit IDs

7QV3|1|a|C|835
7QV3|1|a|U|836
7QV3|1|a|A|837
7QV3|1|a|A|838
*
7QV3|1|a|U|867
7QV3|1|a|G|868
7QV3|1|a|C|869
7QV3|1|a|A|870
7QV3|1|a|G|871
*
7QV3|1|a|C|878
7QV3|1|a|A|879
7QV3|1|a|U|880
7QV3|1|a|U|881
7QV3|1|a|A|882
7QV3|1|a|A|883
7QV3|1|a|G|884

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain h

30S ribosomal protein S8