J3_7QV3_020

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV3_020 not in the Motif Atlas

Homologous match to J3_4LFB_003

Geometric discrepancy: 0.1954

The information below is about J3_4LFB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44359.1

Basepair signature

cWW-tSH-cWW-F-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7QV3|1|a|U|953
7QV3|1|a|G|954
7QV3|1|a|G|955
7QV3|1|a|A|956
*
7QV3|1|a|U|1244
7QV3|1|a|A|1245
7QV3|1|a|C|1246
*
7QV3|1|a|G|1346
7QV3|1|a|G|1347
7QV3|1|a|A|1348
7QV3|1|a|A|1349

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain H

Transfer RNA; tRNA