J3_7QV3_027

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CAAUG*CUCAGUUC*GCUG

Length

17 nucleotides

Bulged bases

7QV3|1|a|U|1249, 7QV3|1|a|U|1311

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV3_027 not in the Motif Atlas

Homologous match to J3_4LFB_009

Geometric discrepancy: 0.1783

The information below is about J3_4LFB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_03192.1

Basepair signature

cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F

Number of instances in this motif group

5

Unit IDs

7QV3|1|a|C|1246
7QV3|1|a|A|1247
7QV3|1|a|A|1248
7QV3|1|a|U|1249
7QV3|1|a|G|1250
*
7QV3|1|a|C|1305
7QV3|1|a|U|1306
7QV3|1|a|C|1307
7QV3|1|a|A|1308
7QV3|1|a|G|1309
7QV3|1|a|U|1310
7QV3|1|a|U|1311
7QV3|1|a|C|1312
*
7QV3|1|a|G|1343
7QV3|1|a|C|1344
7QV3|1|a|U|1345
7QV3|1|a|G|1346

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain m

30S ribosomal protein S13