3D structure

PDB id
7QWR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UAUC*GUU*ACUAAUA
Length
14 nucleotides
Bulged bases
7QWR|1|5|A|4464, 7QWR|1|5|U|4465
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7QWR_015 not in the Motif Atlas
Geometric match to J3_7A0S_011
Geometric discrepancy: 0.2202
The information below is about J3_7A0S_011
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32601.6
Basepair signature
cWW-cWH-cWW-tWH-tSS-F-cWW-F
Number of instances in this motif group
4

Unit IDs

7QWR|1|5|U|4463
7QWR|1|5|A|4464
7QWR|1|5|U|4465
7QWR|1|5|C|4466
*
7QWR|1|5|G|4491
7QWR|1|5|U|4492
7QWR|1|5|U|4493
*
7QWR|1|5|A|4507
7QWR|1|5|C|4508
7QWR|1|5|U|4509
7QWR|1|5|A|4510
7QWR|1|5|A|4511
7QWR|1|5|U|4512
7QWR|1|5|A|4513

Current chains

Chain 5
28S rRNA

Nearby chains

Chain B
Ribosomal protein L3
Chain V
Ribosomal protein L23

Coloring options:


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