J3_7QWS_022
3D structure
- PDB id
- 7QWS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUC*GCCUCACGAUCC*GGUGUC
- Length
- 21 nucleotides
- Bulged bases
- 7QWS|1|5|U|4374
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QWS_022 not in the Motif Atlas
- Geometric match to J3_4V9F_018
- Geometric discrepancy: 0.1717
- The information below is about J3_4V9F_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44792.1
- Basepair signature
- cWW-F-tHH-cWW-tHW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
7QWS|1|5|G|4228
7QWS|1|5|U|4229
7QWS|1|5|C|4230
*
7QWS|1|5|G|4331
7QWS|1|5|C|4332
7QWS|1|5|C|4333
7QWS|1|5|U|4334
7QWS|1|5|C|4335
7QWS|1|5|A|4336
7QWS|1|5|C|4337
7QWS|1|5|G|4338
7QWS|1|5|A|4339
7QWS|1|5|U|4340
7QWS|1|5|C|4341
7QWS|1|5|C|4342
*
7QWS|1|5|G|4370
7QWS|1|5|G|4371
7QWS|1|5|U|4372
7QWS|1|5|G|4373
7QWS|1|5|U|4374
7QWS|1|5|C|4375
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain Q
- Ribosomal protein L18
- Chain T
- 60S ribosomal protein L21
- Chain a
- 60S ribosomal protein L27a
- Chain o
- eL42
Coloring options: