3D structure

PDB id
7S1H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Wild-type Escherichia coli ribosome with antibiotic linezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.35 Å

Loop

Sequence
GGGACG*CC*GAAAAGC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7S1H_037 not in the Motif Atlas
Homologous match to J3_5J7L_069
Geometric discrepancy: 0.062
The information below is about J3_5J7L_069
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_34864.2
Basepair signature
cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
Number of instances in this motif group
4

Unit IDs

7S1H|1|I|G|1424
7S1H|1|I|G|1425
7S1H|1|I|G|1426
7S1H|1|I|A|1427
7S1H|1|I|C|1428
7S1H|1|I|G|1429
*
7S1H|1|I|C|1564
7S1H|1|I|C|1565
*
7S1H|1|I|G|1568
7S1H|1|I|A|1569
7S1H|1|I|A|1570
7S1H|1|I|A|1571
7S1H|1|I|A|1572
7S1H|1|I|G|1573
7S1H|1|I|C|1574

Current chains

Chain I
23S rRNA

Nearby chains

Chain K
50S ribosomal protein L2

Coloring options:


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