J3_7Z20_017
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- GGGACG*CC*GAAAAGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Z20_017 not in the Motif Atlas
- Homologous match to J3_5J7L_069
- Geometric discrepancy: 0.0626
- The information below is about J3_5J7L_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.2
- Basepair signature
- cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7Z20|1|b|G|1423
7Z20|1|b|G|1424
7Z20|1|b|G|1425
7Z20|1|b|A|1426
7Z20|1|b|C|1427
7Z20|1|b|G|1428
*
7Z20|1|b|C|1563
7Z20|1|b|C|1564
*
7Z20|1|b|G|1567
7Z20|1|b|A|1568
7Z20|1|b|A|1569
7Z20|1|b|A|1570
7Z20|1|b|A|1571
7Z20|1|b|G|1572
7Z20|1|b|C|1573
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
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