J3_7Z3O_046

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGAUUAAG*CGCGCAAAU*AGU

Length

20 nucleotides

Bulged bases

7Z3O|1|2|A|47

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7Z3O_046 not in the Motif Atlas

Homologous match to J3_8C3A_083

Geometric discrepancy: 0.1242

The information below is about J3_8C3A_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46317.2

Basepair signature

cWW-F-tWH-cSW-cWW-cWW-F-F-cSW-cWW

Number of instances in this motif group

5

Unit IDs

7Z3O|1|2|A|41
7Z3O|1|2|G|42
7Z3O|1|2|A|43
7Z3O|1|2|U|44
7Z3O|1|2|U|45
7Z3O|1|2|A|46
7Z3O|1|2|A|47
7Z3O|1|2|G|48
*
7Z3O|1|2|C|428
7Z3O|1|2|G|429
7Z3O|1|2|C|430
7Z3O|1|2|G|431
7Z3O|1|2|C|432
7Z3O|1|2|A|433
7Z3O|1|2|A|434
7Z3O|1|2|A|435
7Z3O|1|2|U|436
*
7Z3O|1|2|A|461
7Z3O|1|2|G|462
7Z3O|1|2|U|463

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SX

40S ribosomal protein s23-like protein