J3_7ZTA_018

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZTA_018 not in the Motif Atlas

Homologous match to J3_6PRV_001

Geometric discrepancy: 0.2096

The information below is about J3_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_37832.1

Basepair signature

cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F

Number of instances in this motif group

5

Unit IDs

7ZTA|1|23S1|G|1055
7ZTA|1|23S1|G|1056
7ZTA|1|23S1|A|1057
*
7ZTA|1|23S1|U|1081
7ZTA|1|23S1|U|1082
7ZTA|1|23S1|U|1083
7ZTA|1|23S1|A|1084
7ZTA|1|23S1|A|1085
7ZTA|1|23S1|A|1086
7ZTA|1|23S1|G|1087
*
7ZTA|1|23S1|C|1102
7ZTA|1|23S1|A|1103
7ZTA|1|23S1|C|1104

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L361

50S ribosomal protein L36