J3_8CRX_037

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGGACG*UC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8CRX_037 not in the Motif Atlas

Homologous match to J3_5J7L_069

Geometric discrepancy: 0.0726

The information below is about J3_5J7L_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

8CRX|1|a|G|1604
8CRX|1|a|G|1605
8CRX|1|a|G|1606
8CRX|1|a|A|1607
8CRX|1|a|C|1608
8CRX|1|a|G|1609
*
8CRX|1|a|U|1747
8CRX|1|a|C|1748
*
8CRX|1|a|G|1751
8CRX|1|a|A|1752
8CRX|1|a|A|1753
8CRX|1|a|A|1754
8CRX|1|a|A|1755
8CRX|1|a|G|1756
8CRX|1|a|C|1757

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain c

50S ribosomal protein L2