J3_8FL3_018

3D structure

PDB id

8FL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

UU*AGAAG*CGUGGA

Length

13 nucleotides

Bulged bases

8FL3|1|L3|A|1805, 8FL3|1|L3|G|1833, 8FL3|1|L3|U|1834

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL3|1|L3|U|1726
8FL3|1|L3|U|1727
*
8FL3|1|L3|A|1802
8FL3|1|L3|G|1803
8FL3|1|L3|A|1804
8FL3|1|L3|A|1805
8FL3|1|L3|G|1806
*
8FL3|1|L3|C|1832
8FL3|1|L3|G|1833
8FL3|1|L3|U|1834
8FL3|1|L3|G|1835
8FL3|1|L3|G|1836
8FL3|1|L3|A|1837

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L21

Chain SD

60S ribosomal protein L7