J3_8G2U_011
3D structure
- PDB id
- 8G2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 8G2U|1|v|U|871
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8G2U_011 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.0887
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
8G2U|1|v|C|826
8G2U|1|v|U|827
8G2U|1|v|U|828
8G2U|1|v|G|829
*
8G2U|1|v|C|857
8G2U|1|v|G|858
8G2U|1|v|G|859
8G2U|1|v|A|860
8G2U|1|v|G|861
*
8G2U|1|v|C|868
8G2U|1|v|G|869
8G2U|1|v|U|870
8G2U|1|v|U|871
8G2U|1|v|A|872
8G2U|1|v|A|873
8G2U|1|v|G|874
Current chains
- Chain v
- 16S rRNA
Nearby chains
- Chain a
- 30S ribosomal protein S2
- Chain g
- 30S ribosomal protein S8
- Chain t
- 30S ribosomal protein S21 (Fragment)
Coloring options: