J3_8R3V_037

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8R3V_037 not in the Motif Atlas

Homologous match to J3_5J7L_069

Geometric discrepancy: 0.0684

The information below is about J3_5J7L_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

8R3V|1|72|G|1424
8R3V|1|72|G|1425
8R3V|1|72|G|1426
8R3V|1|72|A|1427
8R3V|1|72|C|1428
8R3V|1|72|G|1429
*
8R3V|1|72|C|1564
8R3V|1|72|C|1565
*
8R3V|1|72|G|1568
8R3V|1|72|A|1569
8R3V|1|72|A|1570
8R3V|1|72|A|1571
8R3V|1|72|A|1572
8R3V|1|72|G|1573
8R3V|1|72|C|1574

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2