J3_8VOR_011

3D structure

PDB id

8VOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 51 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8VOR|1|D|C|1214

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOR|1|D|C|990
8VOR|1|D|U|991
8VOR|1|D|U|992
8VOR|1|D|G|993
8VOR|1|D|A|994
8VOR|1|D|C|995
8VOR|1|D|A|996
8VOR|1|D|U|997
*
8VOR|1|D|A|1044
8VOR|1|D|C|1045
8VOR|1|D|A|1046
8VOR|1|D|G|1047
*
8VOR|1|D|C|1210
8VOR|1|D|U|1211
8VOR|1|D|U|1212
8VOR|1|D|A|1213
8VOR|1|D|C|1214
8VOR|1|D|G|1215

Current chains

Chain D

16S rRNA

Nearby chains

Chain S

30S ribosomal protein S14