J3_9C3H_026
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CCAUAC*GG*UG
- Length
- 10 nucleotides
- Bulged bases
- 9C3H|1|L9|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9C3H_026 not in the Motif Atlas
- Homologous match to J3_8P9A_066
- Geometric discrepancy: 0.0734
- The information below is about J3_8P9A_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_26985.1
- Basepair signature
- cWW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
9C3H|1|L9|C|9
9C3H|1|L9|C|10
9C3H|1|L9|A|11
9C3H|1|L9|U|12
9C3H|1|L9|A|13
9C3H|1|L9|C|14
*
9C3H|1|L9|G|65
9C3H|1|L9|G|66
*
9C3H|1|L9|U|109
9C3H|1|L9|G|110
Current chains
- Chain L9
- 5S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain L8
- Large ribosomal subunit protein uL18
- Chain LT
- Large ribosomal subunit protein eL21
- Chain Lz
- Large ribosomal subunit protein uL16
Coloring options: