J3_9E1S_017
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- UUG*CUAAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- 9E1S|1|I|A|2435
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9E1S_017 not in the Motif Atlas
- Homologous match to J3_8B0X_021
- Geometric discrepancy: 0.0912
- The information below is about J3_8B0X_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17460.1
- Basepair signature
- cWW-tHH-cWW-F-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9E1S|1|I|U|2328
9E1S|1|I|U|2329
9E1S|1|I|G|2330
*
9E1S|1|I|C|2433
9E1S|1|I|U|2434
9E1S|1|I|A|2435
9E1S|1|I|A|2436
9E1S|1|I|C|2437
*
9E1S|1|I|G|2461
9E1S|1|I|G|2462
9E1S|1|I|A|2463
9E1S|1|I|C|2464
9E1S|1|I|A|2465
9E1S|1|I|G|2466
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain H
- 50S ribosomal protein L9
- Chain y
- 50S ribosomal protein bL28-c minus
Coloring options: