J3_9N9J_010

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAC*GCUAAGG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|G|1969
9N9J|1|L5|A|1970
9N9J|1|L5|C|1971
*
9N9J|1|L5|G|1995
9N9J|1|L5|C|1996
9N9J|1|L5|U|1997
9N9J|1|L5|A|1998
9N9J|1|L5|A|1999
9N9J|1|L5|G|2000
9N9J|1|L5|G|2001
*
9N9J|1|L5|C|2016
9N9J|1|L5|A|2017
9N9J|1|L5|C|2018

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain Ls

60S acidic ribosomal protein P0

Chain Lt

60S ribosomal protein L12