J3_9NDP_011

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GAU*GCUAAGG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|5|G|1969
9NDP|1|5|A|1970
9NDP|1|5|U|1971
*
9NDP|1|5|G|1995
9NDP|1|5|C|1996
9NDP|1|5|U|1997
9NDP|1|5|A|1998
9NDP|1|5|A|1999
9NDP|1|5|G|2000
9NDP|1|5|G|2001
*
9NDP|1|5|C|2016
9NDP|1|5|A|2017
9NDP|1|5|C|2018

Current chains

Chain 5

28S rRNA

Nearby chains

Chain s

60S acidic ribosomal protein P0

Chain t

60S ribosomal protein L12