J3_9R3A_006
3D structure
- PDB id
- 9R3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 9R3A|1|A|U|845, 9R3A|1|A|A|847
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9R3A_006 not in the Motif Atlas
- Homologous match to J3_6CZR_018
- Geometric discrepancy: 0.2327
- The information below is about J3_6CZR_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.3
- Basepair signature
- cWW-tSH-F-tWW-tHS-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
9R3A|1|A|C|800
9R3A|1|A|U|801
9R3A|1|A|U|802
9R3A|1|A|G|803
*
9R3A|1|A|C|831
9R3A|1|A|G|832
9R3A|1|A|G|833
9R3A|1|A|A|834
9R3A|1|A|G|835
*
9R3A|1|A|C|842
9R3A|1|A|G|843
9R3A|1|A|U|844
9R3A|1|A|U|845
9R3A|1|A|A|846
9R3A|1|A|A|847
9R3A|1|A|G|848
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain H
- Small ribosomal subunit protein uS8
- Chain U
- Small ribosomal subunit protein bS21
- Chain V
- Small ribosomal subunit protein uS2
Coloring options: