J3_9R3A_024

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9R3A_024 not in the Motif Atlas

Homologous match to J3_7A0S_005

Geometric discrepancy: 0.1131

The information below is about J3_7A0S_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_69816.1

Basepair signature

cWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

9

Unit IDs

9R3A|1|a|C|698
9R3A|1|a|A|699
9R3A|1|a|G|700
*
9R3A|1|a|C|732
9R3A|1|a|G|733
9R3A|1|a|A|734
9R3A|1|a|A|735
9R3A|1|a|C|736
*
9R3A|1|a|G|760
9R3A|1|a|A|761
9R3A|1|a|U|762
9R3A|1|a|G|763

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2