J3_9RHU_002
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AGAUUAAG*CGCGC(A2M)AAU*(A2M)GU
- Length
- 20 nucleotides
- Bulged bases
- 9RHU|1|A1|A|46
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|A|40
9RHU|1|A1|G|41
9RHU|1|A1|A|42
9RHU|1|A1|U|43
9RHU|1|A1|U|44
9RHU|1|A1|A|45
9RHU|1|A1|A|46
9RHU|1|A1|G|47
*
9RHU|1|A1|C|480
9RHU|1|A1|G|481
9RHU|1|A1|C|482
9RHU|1|A1|G|483
9RHU|1|A1|C|484
9RHU|1|A1|A2M|485
9RHU|1|A1|A|486
9RHU|1|A1|A|487
9RHU|1|A1|U|488
*
9RHU|1|A1|A2M|513
9RHU|1|A1|G|514
9RHU|1|A1|U|515
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain U1
- Small ribosomal subunit protein uS4
- Chain i1
- 40S ribosomal protein S23
- Chain q2
- ATP binding cassette subfamily E member 1
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