J3_9SYR_003
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- UUGAAAAG*CG*CA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYR|1|L1|U|380
9SYR|1|L1|U|381
9SYR|1|L1|G|382
9SYR|1|L1|A|383
9SYR|1|L1|A|384
9SYR|1|L1|A|385
9SYR|1|L1|A|386
9SYR|1|L1|G|387
*
9SYR|1|L1|C|414
9SYR|1|L1|G|415
*
9SYR|1|L3|C|19
9SYR|1|L3|A|20
Current chains
- Chain L1
- 28S rRNA
- Chain L3
- 5.8S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L39
- Chain LN
- Green fluorescent protein,Small ubiquitin-related modifier 1,Green fluorescent protein,Small ubiquitin-related modifier 1,Histone H4,X-box-binding protein 1,X-box-binding protein 1
- Chain Lc
- 60S ribosomal protein L4
- Chain Lp
- 60S ribosomal protein L26
- Chain Nd
- Ubiquitin-like protein SMT3,N-alpha-acetyltransferase 40
Coloring options: