J3_9W0N_030
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 9W0N|1|3|U|1212, 9W0N|1|3|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9W0N_030 not in the Motif Atlas
- Homologous match to J3_8B0X_029
- Geometric discrepancy: 0.1356
- The information below is about J3_8B0X_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28881.1
- Basepair signature
- cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
9W0N|1|3|C|990
9W0N|1|3|U|991
9W0N|1|3|U|992
9W0N|1|3|G|993
9W0N|1|3|A|994
9W0N|1|3|C|995
9W0N|1|3|A|996
9W0N|1|3|U|997
*
9W0N|1|3|A|1044
9W0N|1|3|C|1045
9W0N|1|3|A|1046
9W0N|1|3|G|1047
*
9W0N|1|3|C|1210
9W0N|1|3|U|1211
9W0N|1|3|U|1212
9W0N|1|3|A|1213
9W0N|1|3|C|1214
9W0N|1|3|G|1215
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain S
- Small ribosomal subunit protein uS14
Coloring options: