J3_9WNQ_027
3D structure
- PDB id
- 9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 9WNQ|1|b|A|1609, 9WNQ|1|b|A|1610
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9WNQ_027 not in the Motif Atlas
- Homologous match to J3_7A0S_007
- Geometric discrepancy: 0.1422
- The information below is about J3_7A0S_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47341.1
- Basepair signature
- cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
9WNQ|1|b|C|1306
9WNQ|1|b|A|1307
9WNQ|1|b|A|1308
9WNQ|1|b|G|1309
*
9WNQ|1|b|C|1605
9WNQ|1|b|C|1606
9WNQ|1|b|C|1607
9WNQ|1|b|A|1608
9WNQ|1|b|A|1609
9WNQ|1|b|A|1610
9WNQ|1|b|C|1611
*
9WNQ|1|b|G|1620
9WNQ|1|b|U|1621
9WNQ|1|b|G|1622
Current chains
- Chain b
- 23S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
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