J3_9Y4G_040

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UG*UGUC*GAUAA

Length

11 nucleotides

Bulged bases

9Y4G|1|B2|A|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|B2|U|1350
9Y4G|1|B2|G|1351
*
9Y4G|1|B2|U|1360
9Y4G|1|B2|G|1361
9Y4G|1|B2|U|1362
9Y4G|1|B2|C|1363
*
9Y4G|1|B2|G|1375
9Y4G|1|B2|A|1376
9Y4G|1|B2|U|1377
9Y4G|1|B2|A|1378
9Y4G|1|B2|A|1379

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain AA

40S ribosomal protein SA

Chain AC

40S ribosomal protein S2

Chain AR

40S ribosomal protein S17