J4_3J8G_011
3D structure
- PDB id
- 3J8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CGAAG*UUGAC*GGU*AGG
- Length
- 16 nucleotides
- Bulged bases
- 3J8G|1|B|A|2288
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_3J8G_011 not in the Motif Atlas
- Homologous match to J4_4WF9_008
- Geometric discrepancy: 0.24
- The information below is about J4_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
3J8G|1|B|C|2285
3J8G|1|B|G|2286
3J8G|1|B|A|2287
3J8G|1|B|A|2288
3J8G|1|B|G|2289
*
3J8G|1|B|U|2343
3J8G|1|B|U|2344
3J8G|1|B|G|2345
3J8G|1|B|A|2346
3J8G|1|B|C|2347
*
3J8G|1|B|G|2370
3J8G|1|B|G|2371
3J8G|1|B|U|2372
*
3J8G|1|B|A|2381
3J8G|1|B|G|2382
3J8G|1|B|G|2383
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain O
- 50S ribosomal protein L18
- Chain X
- GTPase Der
- Chain Y
- 50S ribosomal protein L27
Coloring options: