J4_3JA1_015
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCG*CGAAAG*CCGUAAACGAUG*CC
- Length
- 23 nucleotides
- Bulged bases
- 3JA1|1|SA|C|576, 3JA1|1|SA|A|815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_3JA1_015 not in the Motif Atlas
- Homologous match to J4_6CZR_013
- Geometric discrepancy: 0.3078
- The information below is about J4_6CZR_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_61885.5
- Basepair signature
- cWW-cWW-cWW-F-F-tHW-F-F-F-F-F-cWW-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
3JA1|1|SA|G|575
3JA1|1|SA|C|576
3JA1|1|SA|G|577
*
3JA1|1|SA|C|764
3JA1|1|SA|G|765
3JA1|1|SA|A|766
3JA1|1|SA|A|767
3JA1|1|SA|A|768
3JA1|1|SA|G|769
*
3JA1|1|SA|C|810
3JA1|1|SA|C|811
3JA1|1|SA|G|812
3JA1|1|SA|U|813
3JA1|1|SA|A|814
3JA1|1|SA|A|815
3JA1|1|SA|A|816
3JA1|1|SA|C|817
3JA1|1|SA|G|818
3JA1|1|SA|A|819
3JA1|1|SA|U|820
3JA1|1|SA|G|821
*
3JA1|1|SA|C|879
3JA1|1|SA|C|880
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SH
- 30S ribosomal protein S8
- Chain SL
- 30S ribosomal protein S12
- Chain SO
- 30S ribosomal protein S15
- Chain SQ
- 30S ribosomal protein S17
- Chain SU
- 30S ribosomal protein S21
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