J4_4CUV_004

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUUC*GGUUAG*CC*GGUCGUAC

Length

21 nucleotides

Bulged bases

4CUV|1|1|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CUV|1|1|G|1492
4CUV|1|1|G|1493
4CUV|1|1|U|1494
4CUV|1|1|U|1495
4CUV|1|1|C|1496
*
4CUV|1|1|G|1520
4CUV|1|1|G|1521
4CUV|1|1|U|1522
4CUV|1|1|U|1523
4CUV|1|1|A|1524
4CUV|1|1|G|1525
*
4CUV|1|1|C|1614
4CUV|1|1|C|1615
*
4CUV|1|1|G|1829
4CUV|1|1|G|1830
4CUV|1|1|U|1831
4CUV|1|1|C|1832
4CUV|1|1|G|1833
4CUV|1|1|U|1834
4CUV|1|1|A|1835
4CUV|1|1|C|1836

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S RRNA