J4_4TUB_002
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GAG*CAUGUG*CAAAG*CGC
- Length
- 17 nucleotides
- Bulged bases
- 4TUB|1|QA|A|197
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4TUB_002 not in the Motif Atlas
- Homologous match to J4_4LFB_002
- Geometric discrepancy: 0.0992
- The information below is about J4_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_88771.1
- Basepair signature
- cWW-tSS-cWW-tSS-cWW-cWW-tWH-tWH-cSH-cWW
- Number of instances in this motif group
- 1
Unit IDs
4TUB|1|QA|G|142
4TUB|1|QA|A|143
4TUB|1|QA|G|144
*
4TUB|1|QA|C|178
4TUB|1|QA|A|179
4TUB|1|QA|U|180
4TUB|1|QA|G|181
4TUB|1|QA|U|182
4TUB|1|QA|G|183
*
4TUB|1|QA|C|194
4TUB|1|QA|A|195
4TUB|1|QA|A|196
4TUB|1|QA|A|197
4TUB|1|QA|G|198
*
4TUB|1|QA|C|219
4TUB|1|QA|G|220
4TUB|1|QA|C|221
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QT
- 30S ribosomal protein S20
Coloring options: