J4_4TUB_013
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAAG*CUGAC*GGG*CGG
- Length
- 16 nucleotides
- Bulged bases
- 4TUB|1|RA|A|2300
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4TUB_013 not in the Motif Atlas
- Homologous match to J4_4WF9_008
- Geometric discrepancy: 0.1693
- The information below is about J4_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4TUB|1|RA|C|2297
4TUB|1|RA|A|2298
4TUB|1|RA|A|2299
4TUB|1|RA|A|2300
4TUB|1|RA|G|2301
*
4TUB|1|RA|C|2355
4TUB|1|RA|U|2356
4TUB|1|RA|G|2357
4TUB|1|RA|A|2358
4TUB|1|RA|C|2359
*
4TUB|1|RA|G|2382
4TUB|1|RA|G|2383
4TUB|1|RA|G|2384
*
4TUB|1|RA|C|2393
4TUB|1|RA|G|2394
4TUB|1|RA|G|2395
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R0
- 50S ribosomal protein L27
- Chain R6
- 50S ribosomal protein L33
- Chain R8
- 50S ribosomal protein L35
- Chain RS
- 50S ribosomal protein L18
Coloring options: