J4_4V66_007
3D structure
- PDB id
- 4V66 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- CC*GAGUAG*UGAAUAUG*CAAG
- Length
- 20 nucleotides
- Bulged bases
- 4V66|1|BB|U|403, 4V66|1|BB|U|405
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4V66_007 not in the Motif Atlas
- Homologous match to J4_7A0S_001
- Geometric discrepancy: 0.571
- The information below is about J4_7A0S_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_94698.1
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
4V66|1|BB|C|268
4V66|1|BB|C|269
*
4V66|1|BB|G|370
4V66|1|BB|A|371
4V66|1|BB|G|372
4V66|1|BB|U|373
4V66|1|BB|A|374
4V66|1|BB|G|375
*
4V66|1|BB|U|399
4V66|1|BB|G|400
4V66|1|BB|A|401
4V66|1|BB|A|402
4V66|1|BB|U|403
4V66|1|BB|A|404
4V66|1|BB|U|405
4V66|1|BB|G|406
*
4V66|1|BB|C|421
4V66|1|BB|A|422
4V66|1|BB|A|423
4V66|1|BB|G|424
Current chains
- Chain BB
- 23S rRNA
Nearby chains
- Chain B4
- 50S ribosomal protein L9
- Chain BS
- 50S ribosomal protein L31
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