J4_4V75_011

3D structure

PDB id

4V75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UC*GGUGAG*CU*AAUCGUA

Length

17 nucleotides

Bulged bases

4V75|1|BA|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4V75_011 not in the Motif Atlas

Homologous match to J4_9DFE_005

Geometric discrepancy: 0.2335

The information below is about J4_9DFE_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_10313.5

Basepair signature

cWW-cWW-tHW-F-F-F-F-F-F-cWW-cWW

Number of instances in this motif group

5

Unit IDs

4V75|1|BA|U|1313
4V75|1|BA|C|1314
*
4V75|1|BA|G|1338
4V75|1|BA|G|1339
4V75|1|BA|U|1340
4V75|1|BA|G|1341
4V75|1|BA|A|1342
4V75|1|BA|G|1343
*
4V75|1|BA|C|1404
4V75|1|BA|U|1405
*
4V75|1|BA|A|1597
4V75|1|BA|A|1598
4V75|1|BA|U|1599
4V75|1|BA|C|1600
4V75|1|BA|G|1601
4V75|1|BA|U|1602
4V75|1|BA|A|1603

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L23