J4_4WT8_015
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CAAAG*CUGAC*GGG*CGG
- Length
- 16 nucleotides
- Bulged bases
- 4WT8|1|C1|A|2299
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4WT8_015 not in the Motif Atlas
- Homologous match to J4_4WF9_008
- Geometric discrepancy: 0.1623
- The information below is about J4_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_04930.6
- Basepair signature
- cWW-F-F-tWW-tHH-cWW-cWW-cHW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WT8|1|C1|C|2296
4WT8|1|C1|A|2297
4WT8|1|C1|A|2298
4WT8|1|C1|A|2299
4WT8|1|C1|G|2300
*
4WT8|1|C1|C|2354
4WT8|1|C1|U|2355
4WT8|1|C1|G|2356
4WT8|1|C1|A|2357
4WT8|1|C1|C|2358
*
4WT8|1|C1|G|2381
4WT8|1|C1|G|2382
4WT8|1|C1|G|2383
*
4WT8|1|C1|C|2392
4WT8|1|C1|G|2393
4WT8|1|C1|G|2394
Current chains
- Chain C1
- 23S rRNA (2899-MER)
Nearby chains
- Chain C7
- 50S ribosomal protein L33
- Chain C9
- 50S ribosomal protein L35
- Chain CR
- 50S ribosomal protein L18
- Chain Ca
- 50S ribosomal protein L27
Coloring options: